TABLE 1

Characteristics of 18 SNPs genotyped in 1,770 subjects

SNP no.rs number of SNPsGenome position*Gene positionLiterature nameGene regionCommon alleleRare alleleSuccess rateMAFGenotype frequency§
012
1rs2117985188035547−180035' regionAG0.790.060.880.110.01
2rs822387188038739−148115' regionTC0.970.090.830.160.01
3rs860291188040659−128915' regionCT0.980.110.800.190.01
4rs17300539188042162−11388−11391,     −11379PromoterGA0.980.100.820.170.01
5rs182052188043484−10066Intron 1AG0.980.340.430.470.11
6rs822388188044986−8564Intron 1TG0.960.300.490.420.09
7rs822391188046505−7045Intron 1TC0.960.180.670.300.03
8rs822393188049028−4522Intron 1CT0.980.220.570.430.001
9rs822394188049430−4120Intron 1CA0.970.170.690.280.03
10rs7649121188051487−2063Intron 1AT0.980.210.650.270.08
11rs2036373188052893−657Intron 1TG0.980.060.890.110.01
12rs9882205188053100−450Intron 1GA0.950.290.500.420.08
13rs224176618805359445Exon 2TG0.990.120.780.210.01
14rs1501299188053825276IVS2G62TIntron 2GT0.990.300.510.400.10
15rs3774261188054261712Intron 2GA0.940.420.320.510.17
16rs173667431880547911242Y111H,     T111H,     331T>CExon 3TC0.950.030.940.060.001
17rs46868041880571883639Exon 3AG0.980.450.300.500.20
18rs10635391880580944545Exon 3GC0.970.110.800.190.01
  • *

    * Relating to the NCBI version build 35;

  • relating to the first position of the translation starting point ATG;

  • portion of successfully typed subjects;

  • §

    § coded genotypes: 0 = homozygote for common allele, 1 = heterozygote, and 2 = homozygote for rare allele.